Showing posts with label URT. Show all posts
Showing posts with label URT. Show all posts

Sunday, December 22, 2019

Twelve weeks of childcare...

To the tune of the twelve days of Xmas

In the first week of childcare,
some kids got sick with me
The lab said they might have HRV

In the second week of childcare,
some kids got sick with me,
Two had paraflu,
and a few might have had an HRV

In the third week of childcare,
some kids got sick with me,
Three had an entero
Two had paraflu
and a few had uncultivable HRV

In the fourth week of childcare,
some kids got sick with me,
Four had OC43
Three had an entero
Two had paraflu
and a few had untypeable HRVs

In the fifth week of childcare,
some kids got sick with me,
Five had MPV
Four had OC43
Three had an entero
Two had paraflu
and a few had something like an HEV

In the sixth week of childcare,
some kids got sick with me,
Six had HKU1
Five had MPV
Four had OC43
Three had an entero
Two had paraflu
and a few had newly identified HRVs

In the seventh week of childcare,
some kids got sick with me,
Seven had an adeno
Six had HKU1
Five had MPV
Four had OC43
Three had an entero
Two had paraflu
and a few had pleconaril-resistant HRVs (we think!)

In the eighth week of childcare,
some kids got sick with me,
Eight had bocavirus
Seven had an adeno
Six had HKU1
Five had MPVs
Four had OC43
Three had an entero
Two had paraflus
and a few were PCR-positive for HRV

In the ninth week of childcare,
some kids got sick with me,
Nine had RSV
Eight had bocavirus
Seven had an adeno
Six had HKU1
Five had MPV
Four had OC43
Three had an entero
Two had paraflu
and a few had antigenically distinct HRVs

In the tenth week of childcare,
some kids got sick with me,
Ten had NL63
Nine had RSV
Eight had bocavirus
Seven had an adeno
Six had HKU1
Five had MPV
Four had OC43
Three had an entero
Two had paraflu
and a few had more than a single HRV

In the eleventh week of childcare,
some kids got sick with me,
Eleven had Wuv and Kiv
Ten had NL63
Nine had RSV
Eight had bocavirus
Seven had an adeno
Six had HKU1
Five had MPV
Four had OC43
Three had an entero
Two had paraflu
and some came from a clade of HRV (which was distinct!)

In the twelfth week of childcare,
some kids got sick with me,
Twelve had IFAV
Eleven had Wuv and Kiv
Ten had NL63
Nine had RSV
Eight had bocavirus
Seven had an adeno
Six had HKU1
Five had MPV
Four had OC43
Three had an entero
Two had paraflu

and a few had what we call HRV C

Thanks to Katherine Arden and Cassandra Faux for helping me put these together back in 2008.

Saturday, December 21, 2019

You're the virus I got...

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The Bocavirus...

To the tune of Copacabana

Its name was boca, it was a parvo
No membrane just a shell, a tiny genome n’ there as well
It was found worldwide, but first in Sweden
And while it might yet be a star, its role remains unclear by far

Around a crowded globe, its mode of spread unknown
It was newly found and yet endemic
PCR helped show

Call it boca, the bocavirus
Quite close to a dog and cow virus
Call it boca, the bocavirus
Coughing and sneezing, expiratory wheezing
But the boca, was it a cause?


Its name was boca, and just this year
It was found in blood and stool, but isolation did not ensue
Although with EM, something was seen
And now systemic is where it’s at, PCR alone is falling flat

And so more questions flow, we still have far to go
Most often found with another virus
Co-detections rule!

Call it boca, the bocavirus
Quite close to a dog and cow virus
Call it boca, the bocavirus
Pneumonia and sneezing, expiratory wheezing
But the boca, its everywhere


Its name is boca, it raises questions
But two years later on, no real answers have been found
It is a virus, on that we’re certain
Still reports from far and near, describe detections everywhere

Sequences don’t change much, although two clades show up
We need more trials and more controls
But will that be enough?

Call it boca, the bocavirus
Quite close to a dog and cow virus
Call it boca, the bocavirus
Gastro and sneezing, expiratory wheezing
What does the boca, do to us?


Thanks to Katherine Arden and Cassandra Faux for helping me put these together back in 2007/8.

Friday, December 20, 2019

Randall the red-nosed toddler...

To the tune of Rudolph the red-nosed reindeer

Randall the red-nosed toddler
Had a very runny nose 
Asthma exacerbation 
Fever adding to his woes 

All of the other toddlers 
Didn't have immunity 
They all came down with symptoms 
Differing in severity 

Then one group of researchers 
Virus-hunting was their game 
Swabbed, extracted, amplified
A rhino POS of course was spied 

Randall’s rhino was sequenced 
Turned out to be rhino C
Randall the red-nosed toddler
Just a 'common' cold indeed!


Randall the red-nosed toddler
Had a very runny nose 
Asthma exacerbation 
Fever adding to his woes 


Thanks to Katherine Arden and Cassandra Faux for helping me put these together back in 2008.

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